Information for motif11


Reverse Opposite:

p-value:1e-30
log p-value:-7.059e+01
Information Content per bp:1.463
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets321.8 +/- 231.2bp
Average Position of motif in Background145.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTTCAC-----
NTTTTAGTTAACNNAGN

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTTCAC-----
NNNTTAGTTAACTNANN

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGAGTTCAC--
ATGACGTCATCN

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGTTCAC----
ANNNCTAGTTAACNGNN

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGAGTTCAC---
TNNNATGATTTCNNCNN

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGAGTTCAC--
GTGACGTCACCG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGAGTTCAC
CAGGTAAGTAT--

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTTCAC-----
NNGTATGTGCACATNNN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTTCAC
NGATGACGTCAT

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGAGTTCAC
TTAAGTGCTT