Information for motif12


Reverse Opposite:

p-value:1e-28
log p-value:-6.506e+01
Information Content per bp:1.712
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets377.9 +/- 317.1bp
Average Position of motif in Background425.0 +/- 320.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0031.1_FOXD1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTAAACCTGAGT
GTAAACAT----

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAAACCTGAGT
TGTAAACAGGA--

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACCTGAGT---
NANTGGAAAAANTGAGTCAN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTAAACCTGAGT
NDGTAAACARRN--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTAAACCTGAGT----
-----CTTGAGTGGCT

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTAAACCTGAGT
TGTAAACA-----

MA0148.3_FOXA1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTAAACCTGAGT
CAAAGTAAACANNNN-

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAAACCTGAGT-
--AAATCACAGCA

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAAACCTGAGT-
-GWAAYHTGABMC

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTAAACCTGAGT
TATGTAAACANG---