Information for motif14


Reverse Opposite:

p-value:1e-24
log p-value:-5.642e+01
Information Content per bp:1.905
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets291.8 +/- 310.7bp
Average Position of motif in Background425.3 +/- 271.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGTAWTGA
--GKTAATGR

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAGTAWTGA
GGTAAGTA----

PH0035.1_Gsc/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGTAWTGA--
NNAAGGGATTAACGANT

PH0055.1_Hoxa7_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAGTAWTGA------
GTAGTAATTAATGGAA

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTAWTGA--
TGAAGGGATTAATCATC

PH0062.1_Hoxb7/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAGTAWTGA------
GTAGTAATTAATGCAA

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAGTAWTGA----
TTGGGGTAATTAACGT

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAWTGA-
TGAACCGGATTAATGAA

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTAWTGA
GGGAGGACNG-

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAWTGA
AAAAACGGATTATTG-