Information for motif19


Reverse Opposite:

p-value:1e-21
log p-value:-4.875e+01
Information Content per bp:1.530
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets404.4 +/- 346.8bp
Average Position of motif in Background259.0 +/- 183.2bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0496.1_MAFK/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAGCAGAAAC
CTGAGTCAGCAATTT-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGAAAC
ANCAGCTG----

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGAAAC
CACAGCAGGGGG

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGAAAC
NAHCAGCTGD---

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGCAGAAAC--
--ACTGAAACCA

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGAAAC
CCACACAGCAGGAGA

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCAGAAAC
TGAGTCAGCA-----

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGAAAC
GAGCACAGCAGGACA

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CAGCAGAAAC-
GCTGAGTCAGCAATTTTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGAAAC
HWWGTCAGCAWWTTT