Information for motif2


Reverse Opposite:

p-value:1e-42
log p-value:-9.676e+01
Information Content per bp:1.860
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets314.1 +/- 318.2bp
Average Position of motif in Background403.3 +/- 299.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0476.1_FOS/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AATGAGTCAGTG
NATGAGTCANN-

MA0462.1_BATF::JUN/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AATGAGTCAGTG
GAAATGACTCA---

MA0491.1_JUND/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AATGAGTCAGTG
NATGAGTCACN-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AATGAGTCAGTG
GATGAGTCAT--

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGTCAGTG
NDATGASTCATH-

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AATGAGTCAGTG
DATGASTCAT--

MA0099.2_JUN::FOS/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AATGAGTCAGTG
--TGAGTCA---

MA0490.1_JUNB/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AATGAGTCAGTG
GGATGACTCAT--

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGTCAGTG
NNATGAGTCATN-

MA0478.1_FOSL2/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AATGAGTCAGTG
GGATGACTCAT--