Information for motif20


Reverse Opposite:

p-value:1e-20
log p-value:-4.674e+01
Information Content per bp:1.625
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets354.3 +/- 338.1bp
Average Position of motif in Background789.3 +/- 504.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCTATTTCTACA
KCTATTTTTRGH

MA0052.2_MEF2A/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCTATTTCTACA-
NNGCTATTTTTAGCN

MA0497.1_MEF2C/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTATTTCTACA--
TTCTATTTTTAGNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTATTTCTACA
-CTATTTTTGG-

MA0466.1_CEBPB/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTATTTCTACA-
--TATTGCACAAT

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTATTTCTACA--
NNTTTTTCTTATNT

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTATTTCTACA----
-ANATTTTTGCAANTN

MA0102.3_CEBPA/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTATTTCTACA--
---ATTGCACAATA

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCTATTTCTACA--
----TTGCAACATN

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCTATTTCTACA
NNNNNNCTTTTATAN-