Information for motif21


Reverse Opposite:

p-value:1e-20
log p-value:-4.635e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets385.3 +/- 434.4bp
Average Position of motif in Background88.4 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TATTTTATCC-----
GATAATTAATCCCTCTT

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTATCC-----
NANANTTAATCCCNNNN

MA0029.1_Mecom/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATCC-
TNTTATCTTATCTT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TATTTTATCC----
TTTTTTTTCNNGTN

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATCC------
NTTGTTAATCCCTCTNN

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATCC------
ATAGTTAATCCCCCTCA

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATCC----
NTNAATTTTATTGNATT

MA0037.2_GATA3/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TATTTTATCC
--TCTTATCT

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TATTTTATCC
--TTTAAT--

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TATTTTATCC
--YSTTATCT