Information for motif28


Reverse Opposite:

p-value:1e-16
log p-value:-3.808e+01
Information Content per bp:1.937
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets435.7 +/- 384.7bp
Average Position of motif in Background622.9 +/- 394.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0018.1_Foxk1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAGGAA----
AAAATGTAAACAAACAG

PB0019.1_Foxl1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAGGAA----
TAAATGTAAACAAAGGT

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAGGAA----
AAAAAGTAAACAAAGAC

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAGGAA----
AAAAAGTAAACAAACAC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAGGAA
CAGGTAAGTAT

MA0025.1_NFIL3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGTAAGGAA
TTATGTAACAT-

MA0593.1_FOXP2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGTAAGGAA-
AAGTAAACAAA

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGTAAGGAA
--GTAAACAT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAAGGAA-
TATGTAAACANG

MA0148.3_FOXA1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAGGAA---
CAAAGTAAACANNNN