Information for motif30


Reverse Opposite:

p-value:1e-15
log p-value:-3.665e+01
Information Content per bp:1.707
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets416.7 +/- 372.1bp
Average Position of motif in Background761.8 +/- 324.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCATGGGCTCA-----
NTNNNGGGGTCANGNNN

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCATGGGCTCA
-CCATGTGCTT-

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGGGCTCA----
NNGTATGTGCACATNNN

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCATGGGCTCA-
---ATGGGGTGAT

MA0147.2_Myc/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCATGGGCTCA
-CCATGTGCTT-

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCATGGGCTCA----
AGAGCGGGGTCAAGTA

NRF1/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCATGGGCTCA
GTGCGCATGCGC---

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCATGGGCTCA-----
CTCCAGGGGTCAATTGA

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCATGGGCTCA-----
GGCGAGGGGTCAAGGGC

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCATGGGCTCA-----
TACATGTGCACATAAAA