Information for motif36


Reverse Opposite:

p-value:1e-14
log p-value:-3.282e+01
Information Content per bp:1.962
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets470.1 +/- 415.6bp
Average Position of motif in Background233.1 +/- 169.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGAGAATGA
--NNNANTGA

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGAGAATGA-
GNNACCGAGAATNNN

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTGAGAATGA-
--GACAATGNN

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTGAGAATGA-
TTGACCGAGAATTCC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGAGAATGA------
AAACATAATGAGGTTGC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTGAGAATGA-
-----CATGAC

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGAGAATGA-
NNNACCGAGAGTNNN

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGAGAATGA-----
WNAGTCADAVTGAAACTN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGAATGA
CSTGGGAAAD-

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------TTGAGAATGA
ATAACCACTTGAAAATT-