Information for motif38


Reverse Opposite:

p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.930
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif84.3
Percentage of Background Sequences with motif2.14%
Average Position of motif in Targets452.2 +/- 370.1bp
Average Position of motif in Background507.3 +/- 493.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGCTGTA------
AGGACGCTGTAAAGGGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TAGCTGTA------
AAGACGCTGTAAAGCGA

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAGCTGTA
BAACAGCTGT-

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAGCTGTA
CAGCTGTT

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAGCTGTA
NAHCAGCTGD-

MA0009.1_T/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAGCTGTA--
CTAGGTGTGAA

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTGTA
NAACAGCTGT-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTGTA
CAGCAGCTGN-

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTGTA
NNGCAGCTGTT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTGTA-
GCAGCTGTNN