Information for motif43


Reverse Opposite:

p-value:1e-6
log p-value:-1.578e+01
Information Content per bp:1.530
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets476.7 +/- 454.2bp
Average Position of motif in Background549.9 +/- 437.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTAAT----
AGNGTTCTAATGANN

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTAAT----
NNNTTTNTAATACNG

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAAT----
AGGACGCTGTAAAGGGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAAT----
AAGACGCTGTAAAGCGA

MA0133.1_BRCA1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTAAT
GTGTTGN---

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTAAT---
NNNTGTTGTTGTTNG

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTAAT--
GTNTTGTTGTGANNT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTTGTAAT
NATGTTGCAA-

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTTGTAAT--
--GKTAATGR

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTAAT
ATGATGCAAT