Information for motif46


Reverse Opposite:

p-value:1e-4
log p-value:-1.030e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets465.8 +/- 394.4bp
Average Position of motif in Background838.1 +/- 455.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGAACAGG
CCAGGAACAG-

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGAACAGG
--CACAGN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGAACAGG----
--AACAGGAAGT

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGAACAGG------
GAAGAACAGGTGTCCG

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAACAGG----
--NACAGGAAAT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGAACAGG----
--ANCAGGATGT

MA0098.2_Ets1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGAACAGG-------
NNNACAGGAAGTGGN

MA0480.1_Foxo1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGAACAGG-
TGTAAACAGGA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAACAGG----
--NNCAGGTGNN

MA0007.2_AR/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGAACAGG------
AAGAACAGAATGTTC