| p-value: | 1e-33 |
| log p-value: | -7.750e+01 |
| Information Content per bp: | 1.782 |
| Number of Target Sequences with motif | 30.0 |
| Percentage of Target Sequences with motif | 0.81% |
| Number of Background Sequences with motif | 0.9 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 470.7 +/- 340.7bp |
| Average Position of motif in Background | 352.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0085.1_Irx4/Jaspar
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
NNTTTTACATGTANNNT |
|
|
|
PH0084.1_Irx3_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
NNTATTACATGTANNNT |
|
|
|
PH0083.1_Irx3_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
ANTATTACATGTANNNN |
|
|
|
MA0142.1_Pou5f1::Sox2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TTCAMATGTACA-
CTTTGTTATGCAAAT |
|
|
|
PH0087.1_Irx6/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
ANTTNTACATGTANTTN |
|
|
|
PH0082.1_Irx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
ANTNTTACATGTATNTA |
|
|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 7 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTCAMATGTACA--
ANTNNTACATGTANNTN |
|
|
|
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTCAMATGTACA-
CATTGTTATGCAAAT |
|
|
|
MA0009.1_T/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTCAMATGTACA
TTCACACCTAG- |
|
|
|
CHR/Cell-Cycle-Exp/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TTCAMATGTACA
CGGTTTCAAA------ |
|
|
|
