| p-value: | 1e-32 |
| log p-value: | -7.403e+01 |
| Information Content per bp: | 1.746 |
| Number of Target Sequences with motif | 29.0 |
| Percentage of Target Sequences with motif | 0.78% |
| Number of Background Sequences with motif | 1.1 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 274.7 +/- 180.9bp |
| Average Position of motif in Background | 348.9 +/- 220.9bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | RCCWGACAATCC
GSCTGTCACTCA |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | RCCWGACAATCC-
-NCTGTCAATCAN |
|
|
|
PH0140.1_Pknox1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----RCCWGACAATCC
AAAGACCTGTCAATCC |
|
|
|
PB0165.1_Sox11_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -RCCWGACAATCC-
NNCNNAACAATTNT |
|
|
|
MA0087.1_Sox5/Jaspar
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | RCCWGACAATCC
---NAACAAT-- |
|
|
|
PB0175.1_Sox4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -RCCWGACAATCC----
TNCNNAACAATTTTTNC |
|
|
|
PH0139.1_Pitx3/Jaspar
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | RCCWGACAATCC----
GNNAGCTAATCCCCCN |
|
|
|
MA0078.1_Sox17/Jaspar
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | RCCWGACAATCC-
----GACAATGNN |
|
|
|
MF0011.1_HMG_class/Jaspar
| Match Rank: | 9 |
| Score: | 0.60
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | RCCWGACAATCC
----AACAAT-- |
|
|
|
PH0141.1_Pknox2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----RCCWGACAATCC
AAGCACCTGTCAATAT |
|
|
|
