Information for motif9


Reverse Opposite:

p-value:1e-32
log p-value:-7.403e+01
Information Content per bp:1.894
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets393.9 +/- 330.6bp
Average Position of motif in Background648.3 +/- 245.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACCCCTGRTGTA--
----ATGATGCAAT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCCCTGRTGTA
-CCTTTGAWGT-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACCCCTGRTGTA--
----MTGATGCAAT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACCCCTGRTGTA
CCCCCTGCTGTG

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------ACCCCTGRTGTA
NNNNTTGACCCCTNNNN--

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACCCCTGRTGTA
TNCCTTTGATGT-

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------ACCCCTGRTGTA
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ACCCCTGRTGTA--
TAGCGCCCCCTGGTGGCCA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACCCCTGRTGTA
-CCTTTGATGT-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACCCCTGRTGTA--
ATTTCCTTTGATCTATA