Motif Name Consensus P-value Log P-value q-value (Benjamini) # of Target Sequences with Motif(of 3703) % of Target Sequences with Motif # of Background Sequences with Motif(of 3935) % of Background Sequences with Motif Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer NRYTTCCGGH 1e-12 -2.949e+01 0.0000 1268.0 34.24% 1130.9 28.74% PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AGAGGAAGTG 1e-11 -2.654e+01 0.0000 678.0 18.31% 559.5 14.22% ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ACAGGAAGTG 1e-11 -2.636e+01 0.0000 1300.0 35.11% 1176.0 29.88% BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer DATGASTCAT 1e-10 -2.434e+01 0.0000 1988.0 53.69% 1900.1 48.29% AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer VTGACTCATC 1e-9 -2.175e+01 0.0000 2037.0 55.01% 1965.3 49.94% Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer GATGASTCATCN 1e-8 -2.014e+01 0.0000 1048.0 28.30% 947.8 24.09% Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer DATGASTCATHN 1e-7 -1.798e+01 0.0000 2002.0 54.06% 1948.4 49.51% Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer MACAGGAAGT 1e-7 -1.717e+01 0.0000 510.0 13.77% 429.9 10.93% EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer ATTTCCTGTN 1e-7 -1.667e+01 0.0000 1091.0 29.46% 1007.3 25.60% EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer VACAGGAAAT 1e-6 -1.572e+01 0.0000 763.0 20.60% 682.3 17.34% ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer ACAGGAAGTG 1e-6 -1.564e+01 0.0000 1672.0 45.15% 1613.5 41.00% OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAACAATG 1e-5 -1.321e+01 0.0000 273.0 7.37% 218.6 5.56% ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer ACVAGGAAGT 1e-5 -1.247e+01 0.0001 924.0 24.95% 860.9 21.88% ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer AACCGGAAGT 1e-5 -1.233e+01 0.0001 1406.0 37.97% 1356.4 34.47% Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer CCWTTGTY 1e-5 -1.216e+01 0.0001 1585.0 42.80% 1544.7 39.25% EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer AVCAGGAAGT 1e-5 -1.181e+01 0.0001 1466.0 39.59% 1422.1 36.14% SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer ASWTCCTGBT 1e-4 -1.150e+01 0.0001 1126.0 30.41% 1072.1 27.24% GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer RACCGGAAGT 1e-4 -1.095e+01 0.0002 1028.0 27.76% 975.9 24.80% Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer ATTGCATCAT 1e-4 -9.981e+00 0.0006 382.0 10.32% 333.4 8.47% MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer TGCTGACTCA 1e-4 -9.931e+00 0.0006 914.0 24.68% 865.4 21.99% Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer YTAATYNRATTA 1e-4 -9.587e+00 0.0008 562.0 15.18% 512.1 13.01% STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer NYTTCCWGGAAR 1e-3 -8.828e+00 0.0016 1019.0 27.52% 980.4 24.92% NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer GGAAATTCCC 1e-3 -8.638e+00 0.0019 106.0 2.86% 78.2 1.99% Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer TAATTAGN 1e-3 -8.416e+00 0.0023 1172.0 31.65% 1141.5 29.01% Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer MTGATGCAAT 1e-3 -8.399e+00 0.0023 452.0 12.21% 409.3 10.40% Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer DCYAAAAATAGM 1e-3 -7.898e+00 0.0035 727.0 19.63% 688.8 17.50% NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer SARTGGAAAAWRTGAGTCAB 1e-3 -7.719e+00 0.0040 303.0 8.18% 266.7 6.78% CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer DRTGTTGCAA 1e-3 -7.491e+00 0.0049 986.0 26.63% 957.0 24.32% Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer NRYTTCCGGY 1e-2 -6.838e+00 0.0091 566.0 15.28% 532.6 13.53% STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer NATTTCCNGGAAAT 1e-2 -6.836e+00 0.0091 369.0 9.96% 335.0 8.51% TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer GAGGTCAAAGGTCA 1e-2 -6.756e+00 0.0092 101.0 2.73% 78.6 2.00% Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer RGCCATTAAC 1e-2 -6.699e+00 0.0095 2699.0 72.89% 2779.2 70.63% NFY(CCAAT)/Promoter/Homer RGCCAATSRG 1e-2 -6.582e+00 0.0103 715.0 19.31% 685.2 17.41% Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer ATTAACACCT 1e-2 -6.015e+00 0.0177 1742.0 47.04% 1760.7 44.74% Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer CTTCCGGGAA 1e-2 -5.992e+00 0.0177 504.0 13.61% 475.1 12.07% Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer HACTTCCGGY 1e-2 -5.945e+00 0.0179 563.0 15.20% 535.4 13.61% CHR/Cell-Cycle-Exp/Homer SRGTTTCAAA 1e-2 -5.945e+00 0.0179 762.0 20.58% 738.0 18.75% NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer GATGACTCAGCA 1e-2 -5.873e+00 0.0182 204.0 5.51% 178.6 4.54% BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer GNCACGTG 1e-2 -5.701e+00 0.0211 1482.0 40.02% 1489.2 37.85% Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer SVYTTCCNGGAARB 1e-2 -5.639e+00 0.0219 703.0 18.98% 680.9 17.30% Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer TGCTGAGTCA 1e-2 -5.611e+00 0.0219 649.0 17.53% 625.4 15.89% Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer CCATTGTTNY 1e-2 -5.589e+00 0.0219 1498.0 40.45% 1507.4 38.31% Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer CCATTGTATGCAAAT 1e-2 -5.511e+00 0.0231 190.0 5.13% 166.9 4.24% AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer CCAGGAACAG 1e-2 -5.393e+00 0.0254 2284.0 61.68% 2345.0 59.59% Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer NGCGTGGGCGGR 1e-2 -5.391e+00 0.0254 130.0 3.51% 109.8 2.79% CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer GHCACGTG 1e-2 -5.219e+00 0.0289 475.0 12.83% 451.5 11.47% Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer TGCGTGGGYG 1e-2 -5.131e+00 0.0309 411.0 11.10% 387.8 9.86% HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer NCYAATAAAA 1e-2 -5.130e+00 0.0309 1236.0 33.38% 1237.2 31.44% Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer AGGTGTGAAM 1e-2 -5.116e+00 0.0309 1047.0 28.27% 1040.9 26.45% Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer RTCACSCCAY 1e-2 -5.030e+00 0.0322 245.0 6.62% 222.0 5.64% HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer BSTTCTRGAABVTTCYAGAA 1e-2 -4.987e+00 0.0329 140.0 3.78% 120.3 3.06% Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer NNTGTGGATTSS 1e-2 -4.813e+00 0.0384 738.0 19.93% 723.0 18.37% Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer ADBTAATTAR 1e-2 -4.811e+00 0.0384 1634.0 44.13% 1659.7 42.18% ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer RCAGGATGTGGT 1e-2 -4.707e+00 0.0411 119.0 3.21% 101.3 2.57% Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer GTRGGTCASTGGGTCA 1e-2 -4.634e+00 0.0434 151.0 4.08% 132.2 3.36% CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer ATTGCGCAAC 1e-1 -4.597e+00 0.0443 939.0 25.36% 933.7 23.73% Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer BCCATTGTTC 1e-1 -4.528e+00 0.0466 894.0 24.14% 887.6 22.56% ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer AVCCGGAAGT 1e-1 -4.087e+00 0.0712 493.0 13.31% 478.4 12.16% PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GTCACGCTCSCTGM 1e-1 -4.006e+00 0.0759 111.0 3.00% 96.7 2.46% Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer SCTGTCAMTCAN 1e-1 -4.005e+00 0.0759 199.0 5.37% 182.9 4.65% Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer CYAAAAATAG 1e-1 -3.988e+00 0.0759 615.0 16.61% 604.6 15.36% NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer KCCACGTGAC 1e-1 -3.795e+00 0.0892 922.0 24.90% 924.0 23.48% GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer CGTGGGTGGTCC 1e-1 -3.775e+00 0.0895 85.0 2.30% 72.8 1.85% Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCHGATTAC 1e-1 -3.773e+00 0.0895 33.0 0.89% 24.7 0.63% REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer GGMGCTGTCCATGGTGCTGA 1e-1 -3.676e+00 0.0958 7.0 0.19% 3.7 0.09% Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer GGTTAAWCATTAA 1e-1 -3.651e+00 0.0968 194.0 5.24% 179.5 4.56% Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer RCCATMTGTT 1e-1 -3.580e+00 0.1024 1606.0 43.37% 1645.3 41.81% Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer ACTYKNATTCGTGNTACTTC 1e-1 -3.548e+00 0.1042 81.0 2.19% 69.7 1.77% Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer HTGCTGAGTCAT 1e-1 -3.495e+00 0.1082 176.0 4.75% 162.5 4.13% BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer NHAACBGYYV 1e-1 -3.425e+00 0.1144 1292.0 34.89% 1316.9 33.47% Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer GKTAATGR 1e-1 -3.365e+00 0.1197 2195.0 59.28% 2274.3 57.80% ETS(ETS)/Promoter/Homer AACCGGAAGT 1e-1 -3.249e+00 0.1327 346.0 9.34% 335.7 8.53% bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer NAGTTTCABTHTGACTNW 1e-1 -3.230e+00 0.1333 597.0 16.12% 593.8 15.09% Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer ATATGCAAAT 1e-1 -3.164e+00 0.1404 444.0 11.99% 436.0 11.08% YY1(Zf)/Promoter/Homer CAAGATGGCGGC 1e-1 -3.070e+00 0.1523 54.0 1.46% 45.5 1.16% SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer AVCAGCTG 1e-1 -3.041e+00 0.1546 2565.0 69.27% 2675.1 67.98% PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer ADGGYAGYAGCATCT 1e-1 -3.000e+00 0.1590 385.0 10.40% 377.8 9.60% NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer WGGGGATTTCCC 1e-1 -2.992e+00 0.1590 521.0 14.07% 517.3 13.15% NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer GGGGGAATCCCC 1e-1 -2.925e+00 0.1671 96.0 2.59% 86.4 2.20% MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer AACAGCTG 1e-1 -2.893e+00 0.1704 828.0 22.36% 837.0 21.27% ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer VAGGTCACNSTGACC 1e-1 -2.864e+00 0.1732 215.0 5.81% 205.6 5.23% MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer GGCVGTTR 1e-1 -2.858e+00 0.1732 1436.0 38.78% 1476.2 37.51% USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer SGTCACGTGR 1e-1 -2.820e+00 0.1766 397.0 10.72% 391.2 9.94% Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer RCCACGTGGYYN 1e-1 -2.819e+00 0.1766 554.0 14.96% 553.9 14.08% Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer SSCMATWAAA 1e-1 -2.775e+00 0.1804 746.0 20.15% 753.4 19.14% Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAW 1e-1 -2.754e+00 0.1822 641.0 17.31% 644.4 16.37% PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer GSCTGTCACTCA 1e-1 -2.610e+00 0.2079 70.0 1.89% 62.2 1.58% Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer AGGTGTCA 1e-1 -2.586e+00 0.2105 2102.0 56.76% 2187.3 55.59% PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer VAGRACAKNCTGTBC 1e-1 -2.564e+00 0.2128 1698.0 45.85% 1758.2 44.68% HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer CARRGKBCAAAGTYCA 1e-1 -2.544e+00 0.2148 405.0 10.94% 402.6 10.23% GFX(?)/Promoter/Homer ATTCTCGCGAGA 1e-1 -2.517e+00 0.2182 12.0 0.32% 8.5 0.22% PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer ACCRTGACTAATTNN 1e-1 -2.416e+00 0.2388 291.0 7.86% 286.6 7.28% ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer AGGCCTRG 1e-1 -2.383e+00 0.2442 890.0 24.03% 910.0 23.13% MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer HWWGTCAGCAWWTTT 1e-1 -2.321e+00 0.2569 423.0 11.42% 423.7 10.77% n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer VRCCACGTGG 1e-1 -2.307e+00 0.2579 526.0 14.20% 530.3 13.48% Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer GTCACGTGGT 1e0 -2.294e+00 0.2585 354.0 9.56% 352.2 8.95% Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer NBWGATAAGR 1e0 -2.238e+00 0.2706 1005.0 27.14% 1032.2 26.23% Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer NAHCAGCTGD 1e0 -2.218e+00 0.2731 1057.0 28.54% 1087.8 27.64% AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer TGGCAGTTGG 1e0 -2.158e+00 0.2871 1279.0 34.54% 1322.8 33.62% EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer DGTCCCYRGGGA 1e0 -2.111e+00 0.2978 175.0 4.73% 170.1 4.32% FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer AGGTCANTGACCTB 1e0 -2.092e+00 0.3007 319.0 8.61% 318.3 8.09% Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer GYMATAAAAH 1e0 -2.005e+00 0.3248 909.0 24.55% 935.4 23.77% RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer AGGTCAAGGTCA 1e0 -1.962e+00 0.3325 24.0 0.65% 20.6 0.52% ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer GGVTCTCGCGAGAAC 1e0 -1.962e+00 0.3325 24.0 0.65% 20.3 0.52% Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer RRSCACTYAA 1e0 -1.958e+00 0.3325 1743.0 47.07% 1817.8 46.19% Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer AAGCACTTAA 1e0 -1.903e+00 0.3461 1886.0 50.93% 1970.4 50.07% HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer TTCTAGAABNTTCTA 1e0 -1.894e+00 0.3461 222.0 6.00% 220.6 5.60% Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer YCATYAATCA 1e0 -1.789e+00 0.3807 1189.0 32.11% 1234.9 31.38% GFY-Staf/Promoters/Homer RACTACAATTCCCAGAAKGC 1e0 -1.788e+00 0.3807 43.0 1.16% 39.5 1.01% ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer AGGAARCAGCTG 1e0 -1.788e+00 0.3807 90.0 2.43% 86.7 2.20% TATA-Box(TBP)/Promoter/Homer CCTTTTAWAGSC 1e0 -1.786e+00 0.3807 1259.0 34.00% 1308.1 33.24% Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer HTTTCCCASG 1e0 -1.763e+00 0.3807 1286.0 34.73% 1337.3 33.98% Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer AGGTGHCAGACA 1e0 -1.756e+00 0.3807 177.0 4.78% 175.6 4.46% STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer TTCCKNAGAA 1e0 -1.745e+00 0.3807 619.0 16.72% 635.7 16.15% NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer YTGCCAAG 1e0 -1.727e+00 0.3807 1325.0 35.78% 1379.7 35.06% RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer NWAACCACADNN 1e0 -1.718e+00 0.3807 944.0 25.49% 977.0 24.83% CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer GCTAATCC 1e0 -1.662e+00 0.3991 2009.0 54.25% 2106.2 53.52% Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer TBGCACGCAA 1e0 -1.621e+00 0.4122 449.0 12.13% 459.4 11.68% NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer CYTGGCABNSTGCCAR 1e0 -1.586e+00 0.4232 393.0 10.61% 401.2 10.19% NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer CTGCGCATGCGC 1e0 -1.583e+00 0.4232 67.0 1.81% 64.1 1.63% JunD(bZIP)/K562-JunD-ChIP-Seq/Homer ATGACGTCATCN 1e0 -1.497e+00 0.4549 132.0 3.56% 131.1 3.33% NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WNTGTTTRYTTTGGCA 1e0 -1.444e+00 0.4760 76.0 2.05% 74.7 1.90% STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer RTTTCTNAGAAA 1e0 -1.426e+00 0.4805 386.0 10.42% 396.5 10.08% HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer GYCATCMATCAT 1e0 -1.340e+00 0.5196 120.0 3.24% 120.4 3.06% Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer CACAGCAGGGGG 1e0 -1.319e+00 0.5264 474.0 12.80% 490.4 12.46% Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer NNNVCTGWGYAAACASN 1e0 -1.300e+00 0.5320 1037.0 28.00% 1084.6 27.56% MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer GCTGASTCAGCA 1e0 -1.293e+00 0.5320 385.0 10.40% 397.7 10.11% Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer CTGTTTAC 1e0 -1.289e+00 0.5320 1768.0 47.75% 1859.3 47.25% Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer ACAGCTGTTN 1e0 -1.287e+00 0.5320 1735.0 46.85% 1824.8 46.37% PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GCAGCCAAGCRTGACH 1e0 -1.285e+00 0.5320 320.0 8.64% 329.4 8.37% Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer TGACCTTTNCNT 1e0 -1.262e+00 0.5320 179.0 4.83% 182.8 4.65% Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer CTAATKGV 1e0 -1.256e+00 0.5320 1705.0 46.04% 1794.0 45.59% Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer GGTGYTGACAGS 1e0 -1.249e+00 0.5320 222.0 6.00% 227.7 5.79% RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer GGGRAARRGRMCAGMTG 1e0 -1.197e+00 0.5544 272.0 7.35% 280.5 7.13% E-box(HLH)/Promoter/Homer SSGGTCACGTGA 1e0 -1.107e+00 0.6025 63.0 1.70% 63.6 1.62% GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NNNNNBAGATAWYATCTVHN 1e0 -1.103e+00 0.6025 244.0 6.59% 252.7 6.42% FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGTAAACAAAAAAGAACAND 1e0 -1.072e+00 0.6145 107.0 2.89% 109.3 2.78% GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATAASR 1e0 -1.063e+00 0.6158 1453.0 39.24% 1531.4 38.92% Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer CTGTCTGG 1e0 -1.058e+00 0.6158 1119.0 30.22% 1177.8 29.93% IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer ACTGAAACCA 1e0 -1.029e+00 0.6281 484.0 13.07% 506.2 12.86% c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer VCCACGTG 1e0 -1.007e+00 0.6374 274.0 7.40% 285.6 7.26% Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer AWWNTGCTGAGTCAT 1e0 -9.935e-01 0.6415 193.0 5.21% 200.7 5.10% Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer BAACAGCTGT 1e0 -9.669e-01 0.6542 601.0 16.23% 631.9 16.06% RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer GCTGTGGTTW 1e0 -9.586e-01 0.6550 820.0 22.14% 863.8 21.95% ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer RGRACASNSTGTYCYB 1e0 -9.490e-01 0.6568 181.0 4.89% 188.4 4.79% RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer TAGGGCAAAGGTCA 1e0 -9.249e-01 0.6682 855.0 23.09% 901.3 22.90% Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer NNNCTTTCCAGGAAA 1e0 -8.958e-01 0.6832 1254.0 33.86% 1325.8 33.69% Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer TWGTCTGV 1e0 -8.798e-01 0.6896 1955.0 52.80% 2070.3 52.61% c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer ATGACGTCATCY 1e0 -8.678e-01 0.6932 475.0 12.83% 500.6 12.72% VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer ARAGGTCANWGAGTTCANNN 1e0 -8.678e-01 0.6932 178.0 4.81% 186.7 4.74% Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer TAATCCCN 1e0 -8.623e-01 0.6932 2686.0 72.54% 2849.0 72.40% RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer AAACCACARM 1e0 -8.559e-01 0.6932 1053.0 28.44% 1113.6 28.30% NRF1/Promoter/Homer STGCGCATGCGC 1e0 -8.549e-01 0.6932 82.0 2.21% 85.3 2.17% Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer BBCTTATCTS 1e0 -8.394e-01 0.6932 665.0 17.96% 702.6 17.86% GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer AAACYKGTTWDACMRGTTTB 1e0 -7.768e-01 0.7299 356.0 9.61% 376.0 9.56% E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer CWGGCGGGAA 1e0 -7.594e-01 0.7379 116.0 3.13% 122.9 3.12% Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer VCAGCTGYTG 1e0 -7.344e-01 0.7518 746.0 20.15% 791.0 20.10% EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer GTCCCCWGGGGA 1e0 -7.324e-01 0.7518 745.0 20.12% 790.7 20.09% GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATGKDGAGATAAG 1e0 -7.206e-01 0.7526 91.0 2.46% 96.9 2.46% NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer ATTTTCCATT 1e0 -7.023e-01 0.7617 954.0 25.76% 1013.7 25.76% Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer CAAAGGTCAG 1e0 -6.973e-01 0.7617 1447.0 39.08% 1537.1 39.06% STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer ABTTCYYRRGAA 1e0 -6.971e-01 0.7617 615.0 16.61% 653.7 16.61% Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer VNRVCAGCTGGY 1e0 -6.935e-01 0.7617 949.0 25.63% 1008.7 25.63% PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer ACTTTCACTTTC 1e0 -6.887e-01 0.7617 595.0 16.07% 632.5 16.07% CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer TGCAGTTCCMVNWRTGGCCA 1e0 -6.649e-01 0.7668 19.0 0.51% 20.8 0.53% Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer CGGTCACSCCAC 1e0 -6.270e-01 0.7917 133.0 3.59% 142.1 3.61% E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer DNRCAGCTGY 1e0 -6.222e-01 0.7917 955.0 25.79% 1017.2 25.85% ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ATTTCCCAGVAKSCY 1e0 -6.204e-01 0.7917 268.0 7.24% 286.1 7.27% PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer TGACCTTTGCCCCA 1e0 -6.193e-01 0.7917 749.0 20.23% 798.5 20.29% Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer GKVTCADRTTWC 1e0 -5.886e-01 0.8033 287.0 7.75% 307.3 7.81% TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer CCWGGAATGY 1e0 -5.739e-01 0.8104 1066.0 28.79% 1137.8 28.91% E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer GGCGGGAARN 1e0 -5.695e-01 0.8104 280.0 7.56% 300.1 7.63% CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer NTNATGCAAYMNNHTGMAAY 1e0 -5.406e-01 0.8282 197.0 5.32% 212.8 5.41% GFY(?)/Promoter/Homer ACTACAATTCCC 1e0 -5.305e-01 0.8318 57.0 1.54% 62.5 1.59% bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer KCACGTGMCN 1e0 -5.302e-01 0.8318 208.0 5.62% 224.3 5.70% Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCAATTA 1e0 -5.299e-01 0.8318 110.0 2.97% 119.3 3.03% MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer RRCAGCTGYTSY 1e0 -5.205e-01 0.8318 617.0 16.66% 661.9 16.82% E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer NVCACCTGBN 1e0 -5.050e-01 0.8341 820.0 22.14% 878.6 22.33% Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer MAATCACTGC 1e0 -5.038e-01 0.8341 713.0 19.25% 764.4 19.43% Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer GGCCATAAATCA 1e0 -5.010e-01 0.8341 636.0 17.18% 682.8 17.35% PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer RGGTCTCTAACY 1e0 -4.881e-01 0.8342 250.0 6.75% 270.4 6.87% GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer NRGVACABNVTGTYCY 1e0 -4.698e-01 0.8450 84.0 2.27% 92.3 2.35% HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer GGCCATAAATCA 1e0 -4.489e-01 0.8580 813.0 21.96% 873.3 22.19% RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer SAAACCACAG 1e0 -4.006e-01 0.8956 779.0 21.04% 839.3 21.33% IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer GAAASYGAAASY 1e0 -3.912e-01 0.8992 151.0 4.08% 166.8 4.24% Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer VBSYGTCTGG 1e0 -3.656e-01 0.9176 1078.0 29.11% 1160.1 29.48% Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer CTGGCAGSCTGCCA 1e0 -3.519e-01 0.9253 367.0 9.91% 400.1 10.17% TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer YCWGGAATGY 1e0 -3.503e-01 0.9253 990.0 26.74% 1067.2 27.12% HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer NTATYGATCH 1e0 -3.192e-01 0.9459 509.0 13.75% 554.5 14.09% Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer GATGACGTCA 1e0 -2.968e-01 0.9623 812.0 21.93% 880.7 22.38% Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer ASATCAAAGGVA 1e0 -2.906e-01 0.9631 463.0 12.50% 506.1 12.86% c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer VVCCACGTGG 1e0 -2.825e-01 0.9659 367.0 9.91% 403.5 10.26% E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer VDTTTCCCGCCA 1e0 -2.792e-01 0.9659 58.0 1.57% 67.6 1.72% Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer CYTGTTTACWYW 1e0 -2.740e-01 0.9659 977.0 26.38% 1058.5 26.90% GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer VAGRACAKWCTGTYC 1e0 -2.510e-01 0.9815 183.0 4.94% 205.5 5.22% Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer SAGATAAGRV 1e0 -2.495e-01 0.9815 578.0 15.61% 632.6 16.08% KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer DGGGYGKGGC 1e0 -2.475e-01 0.9815 725.0 19.58% 790.2 20.08% CRE(bZIP)/Promoter/Homer CSGTGACGTCAC 1e0 -2.436e-01 0.9815 169.0 4.56% 190.1 4.83% Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer GTTGCCATGGCAACM 1e0 -2.425e-01 0.9815 87.0 2.35% 100.3 2.55% Sp1(Zf)/Promoter/Homer GGCCCCGCCCCC 1e0 -2.048e-01 1.0000 143.0 3.86% 163.1 4.15% ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer AGGCCTAG 1e0 -1.826e-01 1.0000 1098.0 29.65% 1195.3 30.38% Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer NRAACCRGTTYRAACCRGYT 1e0 -1.824e-01 1.0000 106.0 2.86% 123.3 3.13% Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer BTCAAGGTCA 1e0 -1.589e-01 1.0000 532.0 14.37% 590.0 14.99% p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer RRCATGYCYRGRCATGYYYN 1e0 -1.587e-01 1.0000 81.0 2.19% 96.0 2.44% p53(p53)/Saos-p53-ChIP-Seq/Homer RRCATGYCYRGRCATGYYYN 1e0 -1.587e-01 1.0000 81.0 2.19% 96.0 2.44% Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer TGATTRATGGCY 1e0 -1.445e-01 1.0000 244.0 6.59% 277.7 7.06% Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer RSCACTYRAG 1e0 -1.378e-01 1.0000 1980.0 53.47% 2140.3 54.39% X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA 1e0 -1.308e-01 1.0000 121.0 3.27% 143.0 3.63% NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer GCCATCTGTT 1e0 -1.178e-01 1.0000 717.0 19.36% 793.2 20.16% EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer GGYAGCAYDTGCTDCCCNNN 1e0 -1.107e-01 1.0000 14.0 0.38% 20.0 0.51% Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer NTAATTDGCYAATTANNWWD 1e0 -1.075e-01 1.0000 39.0 1.05% 50.9 1.29% Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer ASWTCAAAGG 1e0 -1.072e-01 1.0000 246.0 6.64% 282.1 7.17% p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer NNDRCATGYCYNRRCATGYH 1e0 -1.021e-01 1.0000 302.0 8.16% 344.7 8.76% FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer WAAGTAAACA 1e0 -9.604e-02 1.0000 1268.0 34.24% 1388.2 35.28% FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WAAGTAAACA 1e0 -9.501e-02 1.0000 1440.0 38.89% 1572.8 39.97% p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer ACATGCCCGGGCAT 1e0 -9.130e-02 1.0000 16.0 0.43% 24.0 0.61% HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer TACGTGCV 1e0 -9.028e-02 1.0000 150.0 4.05% 177.3 4.51% TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer ACWTCAAAGG 1e0 -8.711e-02 1.0000 58.0 1.57% 73.9 1.88% Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer GCCACACCCA 1e0 -8.548e-02 1.0000 265.0 7.16% 305.1 7.75% IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer GAAAGTGAAAGT 1e0 -8.497e-02 1.0000 172.0 4.64% 202.2 5.14% Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer GTCATGCHTGRCTGS 1e0 -8.420e-02 1.0000 254.0 6.86% 293.3 7.45% GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer CRGCTGBNGNSNNSAGATAA 1e0 -7.007e-02 1.0000 98.0 2.65% 120.9 3.07% RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer CGGTTGCCATGGCAAC 1e0 -6.364e-02 1.0000 74.0 2.00% 93.3 2.37% E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer GGCGGGAAAH 1e0 -5.319e-02 1.0000 202.0 5.46% 239.6 6.09% FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer NYYTGTTTACHN 1e0 -5.275e-02 1.0000 638.0 17.23% 718.3 18.25% GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATSTNDNNDSAGATAASN 1e0 -4.977e-02 1.0000 92.0 2.48% 115.9 2.94% TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer GGTCANYTGAGGWCA 1e0 -4.521e-02 1.0000 354.0 9.56% 410.0 10.42% AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer SCCTSAGGSCAW 1e0 -4.389e-02 1.0000 682.0 18.42% 768.9 19.54% EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer NWGGGTGTGGCY 1e0 -3.906e-02 1.0000 153.0 4.13% 186.5 4.74% E2F(E2F)/Cell-Cycle-Exp/Homer TTSGCGCGAAAA 1e0 -3.730e-02 1.0000 22.0 0.59% 33.6 0.85% AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer ATGCCCTGAGGC 1e0 -2.927e-02 1.0000 523.0 14.12% 599.8 15.24% Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer CVGTSCTCCC 1e0 -2.849e-02 1.0000 1174.0 31.70% 1305.1 33.17% Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer BTCAAGGTCA 1e0 -2.606e-02 1.0000 383.0 10.34% 446.8 11.35% T1ISRE(IRF)/Ifnb-Exp/Homer ACTTTCGTTTCT 1e0 -1.741e-02 1.0000 8.0 0.22% 16.4 0.42% Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer KTGACCTTGA 1e0 -1.612e-02 1.0000 515.0 13.91% 596.4 15.16% Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer SCCTAGCAACAG 1e0 -1.517e-02 1.0000 308.0 8.32% 367.6 9.34% CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer CCATATATGGNM 1e0 -1.392e-02 1.0000 311.0 8.40% 371.6 9.44% PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer MGGAAGTGAAAC 1e0 -1.353e-02 1.0000 1236.0 33.38% 1381.7 35.11% GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NAGATWNBNATCTNN 1e0 -1.094e-02 1.0000 70.0 1.89% 96.6 2.45% Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer KGTTGCCATGGCAA 1e0 -7.845e-03 1.0000 191.0 5.16% 239.0 6.07% ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER AGTTTCASTTTC 1e0 -5.177e-03 1.0000 85.0 2.30% 117.1 2.98% Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer GGGGGGGG 1e0 -2.096e-03 1.0000 560.0 15.12% 663.7 16.87% LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer RGGTTACTANAGGTCA 1e0 -1.347e-03 1.0000 72.0 1.94% 107.0 2.72% HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer GCACGTACCC 1e0 -7.350e-04 1.0000 207.0 5.59% 270.7 6.88% BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer CNNBRGCGCCCCCTGSTGGC 1e0 -1.000e-06 1.0000 191.0 5.16% 278.8 7.09% CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer AYAGTGCCMYCTRGTGGCCA 1e0 -0.000e+00 1.0000 158.0 4.27% 265.6 6.75%