Information for motif11


Reverse Opposite:

p-value:1e-16
log p-value:-3.878e+01
Information Content per bp:1.695
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets683.3 +/- 435.2bp
Average Position of motif in Background793.9 +/- 208.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTCGATCGA
DGATCRATAN-

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GGTCGATCGA
CTCCAGGGGTCAATTGA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTCGATCGA
AGGTCA-----

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGTCGATCGA---
TCCGTCGCTTAAAAG

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------GGTCGATCGA
NNANTGGTGGTCTTNNN-

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GGTCGATCGA
GGCGAGGGGTCAAGGGC

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGTCGATCGA
-GTGGAT---

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------GGTCGATCGA
AGAGCGGGGTCAAGTA-

MA0070.1_PBX1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GGTCGATCGA---
-TTTGATTGATGN

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GGTCGATCGA---
GTAGGTCACTGGGTCA