Information for motif13


Reverse Opposite:

p-value:1e-15
log p-value:-3.664e+01
Information Content per bp:1.509
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets422.0 +/- 322.0bp
Average Position of motif in Background367.2 +/- 335.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAACCAGAATA---
CAAACAACAACACCT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACAACCAGAATA
-AAACCACANN-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAACCAGAATA
NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAACCAGAATA---
CAAACCACAAACCCC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAACCAGAATA
NAAACCACAG--

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAACCAGAATA
-AAACCACAGAN

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ACAACCAGAATA
ATGTCACAACAACAC--

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAACCAGAATA-----
AACACCAAAACAAAGGA

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAACCAGAATA--
TTGACCGAGAATTCC

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAACCAGAATA--
AACAAACAACAAGAG