Information for motif21


Reverse Opposite:

p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.983
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets453.0 +/- 407.1bp
Average Position of motif in Background390.8 +/- 168.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ATAATGAAAT---
AAACATAATGAGGTTGC

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATAATGAAAT
ATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATAATGAAAT
MTGATGCAAT

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATAATGAAAT-
ATTGTGCAATA

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATAATGAAAT---
GACGATAATGAGCTTGC

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATAATGAAAT----
AATGCAATAAAATTTAT

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATAATGAAAT----
TTGAATGAAATTCGA

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATAATGAAAT---
TAGGTAATAAAATTCA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATAATGAAAT
GKTAATGR---

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATAATGAAAT--
YTAATYNRATTA