Information for motif22


Reverse Opposite:

p-value:1e-12
log p-value:-2.932e+01
Information Content per bp:1.713
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets467.2 +/- 525.0bp
Average Position of motif in Background566.4 +/- 635.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.77
Offset:5
Orientation:reverse strand
Alignment:TCCATACAGCTG---
-----HCAGCTGDTN

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:TCCATACAGCTG
----AACAGCTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TCCATACAGCTG-
---NNACAGCTGC

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.75
Offset:5
Orientation:reverse strand
Alignment:TCCATACAGCTG---
-----ACAGCTGTTV

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TCCATACAGCTG---
-----ACAGCTGTTN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TCCATACAGCTG---
-----NCAGCTGCTG

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TCCATACAGCTG---
----AACAGCTGCAG

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TCCATACAGCTG---
----GACAGCTGCAG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TCCATACAGCTG----
----AGCAGCTGCTNN

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:TCCATACAGCTG--
------CAGCTGNT