Information for motif23


Reverse Opposite:

p-value:1e-12
log p-value:-2.813e+01
Information Content per bp:1.537
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets390.6 +/- 423.5bp
Average Position of motif in Background782.6 +/- 659.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATATYTCCAAGA-
--ATTTCCAAGAA

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATATYTCCAAGA
--TTTTCCA---

MA0463.1_Bcl6/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATATYTCCAAGA--
NGCTTTCTAGGAAN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATATYTCCAAGA
--ACATCAAAGG

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATATYTCCAAGA--
NNNCTTTCCAGGAAA

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATATYTCCAAGA-
ANATTTTTGCAANTN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATATYTCCAAGA--
--NTTTCTNAGAAA

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATATYTCCAAGA--
---TTTCCCAGAAN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATATYTCCAAGA-----
-TCTTTCGAGGAATTTG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATATYTCCAAGA
-ATTTTCCATT-