Information for motif24


Reverse Opposite:

p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.590
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets384.2 +/- 384.4bp
Average Position of motif in Background873.1 +/- 285.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAATTGAAGACA
CGGAAGTGAAAC--

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAATTGAAGACA
----TGTAAACA

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAATTGAAGACA-
AATCAATTCAATAATT

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAATTGAAGACA
GGGAATTGTAGT--

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAATTGAAGACA
GGACTGAATTCATGCC-

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAATTGAAGACA----
-ATTTGCATACAATGG

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAATTGAAGACA---
ANNTTTTACGACNTNN

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAATTGAAGACA---
NNNATTTTACGACNNTN

PH0076.1_Hoxd11/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAATTGAAGACA---
ANNATTTTACGACNTNA

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAATTGAAGACA--
--GGTGYTGACAGS