Information for motif26


Reverse Opposite:

p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.645
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets402.5 +/- 346.8bp
Average Position of motif in Background710.1 +/- 623.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.78
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGATTGG
NNNNTGCCAGTGATTG-

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CAGTGATTGG
CNGTGATTTN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGATTGG
GCAGTGATTT-

MA0483.1_Gfi1b/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGATTGG
TGCTGTGATTT-

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGTGATTGG
-AATAATT--

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGATTGG
TTAAGTGCTT--

MA0502.1_NFYB/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGTGATTGG-------
--CTGATTGGTCNATTT

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGTGATTGG-----
---TGATTGGCTANN

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGATTGG----
NNNNGTTGATTGGGTCG

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGTGATTGG
TTAAGTGGA---