Information for motif30


Reverse Opposite:

p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.897
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets397.0 +/- 352.3bp
Average Position of motif in Background477.9 +/- 306.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCSATCTCCA-
-----ATCCAC

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCSATCTCCA
---TTTTCCA

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCSATCTCCA-
---ATTTCCTG

MA0136.1_ELF5/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCSATCTCCA-
--TACTTCCTT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCSATCTCCA--
--ATTTTCCATT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCSATCTCCA
NTATYGATCH---

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCSATCTCCA-----
NTNNCGTATCCAAGTNN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCSATCTCCA---
---ATTTCCTGTN

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCSATCTCCA--
ACCACATCCTGT

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCSATCTCCA--
--NRYTTCCGGH