Information for motif31


Reverse Opposite:

p-value:1e-10
log p-value:-2.339e+01
Information Content per bp:1.504
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets343.0 +/- 318.3bp
Average Position of motif in Background498.1 +/- 245.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGAGATGGCCC
AACAGATGGC--

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGAGATGGCCC
ACAGGATGTGGT--

MA0461.1_Atoh1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGAGATGGCCC
--CAGATGGC--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGATGGCCC
NACAGGAAAT-----

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGAGATGGCCC--
AAGGCCAGATGGTCCGG

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGAGATGGCCC
CAGGAAAT-----

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGATGGCCC---
TGGCCACCAGGTGGCACTNT

MA0098.2_Ets1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGATGGCCC
NNNACAGGAAGTGGN--

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGAGATGGCCC
VNAVCAGCTGGC--

MA0136.1_ELF5/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGATGGCCC
AAGGAAGTA----