Information for motif33


Reverse Opposite:

p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets624.9 +/- 505.5bp
Average Position of motif in Background269.8 +/- 200.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GACTTTAAAGGG
-ACWTCAAAGG-

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GACTTTAAAGGG
GNCTATAAAAGG

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GACTTTAAAGGG
-ACATCAAAGG-

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACTTTAAAGGG-
-ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACTTTAAAGGG-
AAAGATCAAAGGAA

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACTTTAAAGGG-
---TTTAATTGCN

PB0184.1_Tbp_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GACTTTAAAGGG
GNNCGCTTAAATCGG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GACTTTAAAGGG
NNATTGGACTTTNGNN--

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACTTTAAAGGG---
TATAGATCAAAGGAAAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACTTTAAAGGG---
TATAGATCAAAGGAAAA