Information for motif34


Reverse Opposite:

p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.661
Number of Target Sequences with motif472.0
Percentage of Target Sequences with motif16.77%
Number of Background Sequences with motif413.1
Percentage of Background Sequences with motif12.84%
Average Position of motif in Targets426.8 +/- 392.0bp
Average Position of motif in Background499.2 +/- 492.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCACKGC--
CCAACTGCCA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCACKGC-
-YAACBGCC

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCACKGC--
NHAACBGYYV

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCACKGC
CTAATKGV

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCACKGC----
CGACCAACTGCCGTG

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCACKGC-----
CGACCAACTGCCATGC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCACKGC------
AATCGCACTGCATTCCG

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCACKGC
NNACTTACCTN

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCACKGC---
ACCACTCTCGGTCAC

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCACKGC-
ACTTCCGGTN