Information for motif4


Reverse Opposite:

p-value:1e-24
log p-value:-5.559e+01
Information Content per bp:1.892
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets487.9 +/- 465.7bp
Average Position of motif in Background471.1 +/- 373.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AYCACCCAGA
GGACCACCCACG

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AYCACCCAGA-
TATCGACCCCCCACAG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AYCACCCAGA--
YCCGCCCACGCN

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AYCACCCAGA--
ANNTNCCCACCCANNAC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AYCACCCAGA-----
ATTTCCCAGVAKSCY

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AYCACCCAGA--
--CRCCCACGCA

MA0472.1_EGR2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AYCACCCAGA---
CCCCCGCCCACGCAC

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AYCACCCAGA---
AAGCCCCCCAAAAAT

MA0597.1_THAP1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AYCACCCAGA
-CTGCCCGCA

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AYCACCCAGA
GCCCCACCCA--