Information for motif41


Reverse Opposite:

p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets409.2 +/- 357.1bp
Average Position of motif in Background397.6 +/- 324.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TTGGATGGAAAG-
---AATGGAAAAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTGGATGGAAAG
TATTATGGGATGGATAA

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTGGATGGAAAG
-----TGGAAAA

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGGATGGAAAG
CCATTGTATGCAAAT

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGGATGGAAAG--
GTATTGGGTGGGTAATT

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGGATGGAAAG
-GGGCGGGAAGG

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTGGATGGAAAG----------
--NANTGGAAAAANTGAGTCAN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGGATGGAAAG-
-TGGCGGGAAAHB

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTGGATGGAAAG
TTCTNMGGAA--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTGGATGGAAAG
--GGCGGGAARN