Information for motif43


Reverse Opposite:

p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets565.6 +/- 415.8bp
Average Position of motif in Background140.0 +/- 228.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCACCGT
CAAATCACTG-

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCACCGT------
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCACCGT------
ATGGAAACCGTTATTTT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCACCGT
AAATCACTGC

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCACCGT-
AAATCACAGCA

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATCACCGT---
CATAAGACCACCATTAC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCACCGT
-TCCCCA-

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------ATCACCGT-
AAGGCGAAATCATCGCA

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATCACCGT-----
NNNNATGACCTTGANTN

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCACCGT------
CAATCACTGGCAGAAT