Information for motif44


Reverse Opposite:

p-value:1e-5
log p-value:-1.374e+01
Information Content per bp:1.801
Number of Target Sequences with motif651.0
Percentage of Target Sequences with motif23.13%
Number of Background Sequences with motif627.2
Percentage of Background Sequences with motif19.50%
Average Position of motif in Targets487.3 +/- 430.2bp
Average Position of motif in Background571.7 +/- 490.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGGGTTAC-----
GCTGGGGGGTACCCCTT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTTAC
NGGGATTA-

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGTTAC----
NTNNNGGGGTCANGNNN

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTTAC----
GGCGAGGGGTCAAGGGC

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGTTAC--
NNNATTGGGGGTNTCCT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTTAC
NNTGTGGTTT-

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTTAC
CTGTGGTTTN

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTAC-
GGGGATTTCC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTTAC---
CGCGCCGGGTCACGTA

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGGTTAC-----
AGGGGGATTAGCTGCC