Information for motif45


Reverse Opposite:

p-value:1e-5
log p-value:-1.177e+01
Information Content per bp:1.928
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif81.8
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets645.9 +/- 464.1bp
Average Position of motif in Background737.5 +/- 516.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGGCGT----
NNNAAGGGGGCGGGNNN

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---AGGGGCGT------
NNNTNGGGCGTATNNTN

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGCGT------
NNAGGGGCGGGGTNNA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCGT----
NNTNAGGGGCGGNNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCGT-----
NNTNNGGGGCGGNGNGN

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGGCGT-
ANTGCGGGGGCGGN

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCGT-----
AGGGGGCGGGGCTG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGGGGCGT---
-DGGGYGKGGC

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGGGCGT----
GGGGGCGGGGCC

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGGGGCGT-----
NTNTGGGGGGTCNNNA