Information for motif5


Reverse Opposite:

p-value:1e-19
log p-value:-4.589e+01
Information Content per bp:1.788
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets349.4 +/- 278.9bp
Average Position of motif in Background1060.1 +/- 285.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGTTC
--NHAACBGYYV

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCAAACTGTTC
--CCAACTGCCA

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCAAACTGTTC----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCAAACTGTTC----
ATGGAAACCGTTATTTT

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGTTC----
--AAAATTGTTATGAA

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCAAACTGTTC---
CNGACACCTGTTCNNN

MA0100.2_Myb/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGTTC
--CCAACTGCCA

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCAAACTGTTC--
CGACCAACTGCCGTG

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCAAACTGTTC-----
AATCAATTGTTCCGCTA

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCCAAACTGTTC
-----ATTGTTA