Information for motif50


Reverse Opposite:

p-value:1e-1
log p-value:-2.349e+00
Information Content per bp:1.760
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif144.1
Percentage of Background Sequences with motif4.48%
Average Position of motif in Targets597.2 +/- 489.7bp
Average Position of motif in Background594.1 +/- 498.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGSCT---
GNNACCGAGAATNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGSCT---
NNNACCGAGAGTNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCGAGSCT---
TTGACCGAGAATTCC

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGAGSCT
CGGAGC--

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGAGSCT
AGCGCGCC-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGAGSCT
--CAGCC-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCGAGSCT--
ATTGCCTGAGGCAAT

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGAGSCT-----
GCCGCGCAGTGCGT

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------CCGAGSCT
TAGTATTTCCGATCTT

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGSCT----
NTCGCGCGCCTTNNN