Information for motif8


Reverse Opposite:

p-value:1e-18
log p-value:-4.276e+01
Information Content per bp:1.711
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets378.5 +/- 400.9bp
Average Position of motif in Background672.7 +/- 441.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0042.1_FOXI1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TATTTATGTCTG
GGATGTTTGTTT---

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TATTTATGTCTG
TGTTTATTT---

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TATTTATGTCTG
KCTATTTTTRGH--

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TATTTATGTCTG------
-NNTNNTGTCTGGNNTNG

MA0465.1_CDX2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TATTTATGTCTG
-TTTTATGGCTN

MA0497.1_MEF2C/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TATTTATGTCTG
TTCTATTTTTAGNNN

MA0052.2_MEF2A/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TATTTATGTCTG
NNGCTATTTTTAGCN-

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATTTATGTCTG
NTTTTATGAC--

MA0030.1_FOXF2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTTATGTCTG
NTTGTTTACGTTNN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TATTTATGTCTG-
-----CTGTCTGG