Information for motif9


Reverse Opposite:

p-value:1e-18
log p-value:-4.276e+01
Information Content per bp:1.779
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets295.9 +/- 304.8bp
Average Position of motif in Background726.4 +/- 292.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTGACAAGGCCA
--BTCAAGGTCA

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTGACAAGGCCA
--NTCAAGGTCA

MA0141.2_Esrrb/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGACAAGGCCA
AGCTCAAGGTCA

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTGACAAGGCCA--
---CCAAGGTCACA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTGACAAGGCCA-
---TCAAGGTCAN

MA0160.1_NR4A2/Jaspar

Match Rank:6
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTGACAAGGCCA-
-----AAGGTCAC

MA0505.1_Nr5a2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGACAAGGCCA--
AAGTTCAAGGTCAGC

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGACAAGGCCA-----
TATTCAAGGTCATGCGA

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGACAAGGCCA-
TAAACTGATAAGAAGAT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGACAAGGCCA
CAGATAAGGN--