Information for motif10


Reverse Opposite:

p-value:1e-44
log p-value:-1.028e+02
Information Content per bp:1.962
Number of Target Sequences with motif333.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets473.8 +/- 427.2bp
Average Position of motif in Background480.6 +/- 450.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0156.1_FEV/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CCAGGAAATC
-CAGGAAAT-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAAATC
NACAGGAAAT-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAAATC
NACAGGAAAT-

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAAATC
AVCAGGAAGT-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCAGGAAATC
ACAGGAAGTG

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CCAGGAAATC
NNNCTTTCCAGGAAA--

MA0518.1_Stat4/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCAGGAAATC-
TTTCCAGGAAATGG

MA0137.3_STAT1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCAGGAAATC
TTTCCAGGAAA--

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAAATC-
AACAAGGAAGTAA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAAATC
ANCAGGATGT-