Information for motif19


Reverse Opposite:

p-value:1e-36
log p-value:-8.456e+01
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets409.9 +/- 344.4bp
Average Position of motif in Background1016.8 +/- 514.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CGATCATGACAA
----CATGAC--

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGATCATGACAA
TAGTGATCATCATTA

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGATCATGACAA---
ATGTCACAACAACAC

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGATCATGACAA
---NCGTGACN-

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGATCATGACAA-----
--ACCGTGACTAATTNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGATCATGACAA-----
-ATTTACGACAAATAGC

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGATCATGACAA----
--NNCNNAACAATTNT

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGATCATGACAA---
-NTTNAGAACAATTA

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGATCATGACAA------
-GATATTGACAGCTGCGT

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGATCATGACAA----
AACACCAAAACAAAGGA