Information for motif20


Reverse Opposite:

p-value:1e-36
log p-value:-8.456e+01
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets397.9 +/- 358.3bp
Average Position of motif in Background424.9 +/- 78.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TCATTGACGTTA
----TGACGT--

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCATTGACGTTA
----TGACGTCA

PB0004.1_Atf1_1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCATTGACGTTA----
NCGATGACGTCATCGN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCATTGACGTTA--
----TGACGTCATC

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCATTGACGTTA-
-CGGTGACGTCAC

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCATTGACGTTA
NANTTCATTGAATTA-

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCATTGACGTTA----
CCGATGACGTCATCGT

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCATTGACGTTA---
---ATGACGTCATCN

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTGACGTTA
NNCATTCATTCATNNN-

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCATTGACGTTA
AGGTCANTGACCTN-