Information for motif22


Reverse Opposite:

p-value:1e-36
log p-value:-8.321e+01
Information Content per bp:1.530
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets569.5 +/- 506.5bp
Average Position of motif in Background1000.6 +/- 451.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GACCACAACACG-
CAAACAACAACACCT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GACCACAACACG
NWAACCACADNN--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACCACAACACG
AAACCACAGC---

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACCACAACACG
NAAACCACAG----

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACCACAACACG---
AACACCAAAACAAAGGA

MA0133.1_BRCA1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GACCACAACACG
----ACAACAC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACCACAACACG
AAACCACANN---

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCACAACACG
AAACCACAGAN--

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GACCACAACACG-
CAAACCACAAACCCC

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACCACAACACG--
ATGTCACAACAACAC