Information for motif23


Reverse Opposite:

p-value:1e-35
log p-value:-8.186e+01
Information Content per bp:1.530
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets415.7 +/- 387.3bp
Average Position of motif in Background709.9 +/- 541.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTCAATAAGCGA-
ATGGTTCAATAATTTTG

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTCAATAAGCGA
AATCAATTCAATAATT--

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCAATAAGCGA---
CATACAATACGAAATAA

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTCAATAAGCGA
GAAGATCAATCACTAA

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTCAATAAGCGA
TAATTCAATGAAGTG

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTCAATAAGCGA
GAAGATCAATCACTTA

MA0158.1_HOXA5/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCAATAAGCGA
---AATTAGTG-

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTCAATAAGCGA
DGATCRATAN----

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTCAATAAGCGA
-BCMATTAG---

MA0040.1_Foxq1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTCAATAAGCGA--
---AATAAACAATN