Information for motif27


Reverse Opposite:

p-value:1e-34
log p-value:-7.846e+01
Information Content per bp:1.985
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets440.3 +/- 428.8bp
Average Position of motif in Background667.7 +/- 575.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GGTTATGCAT-----
TNNATTATGCATANNTT

MA0102.3_CEBPA/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTTATGCAT-
NATTGTGCAAT

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTTATGCAT--
TTCATTTGCATAT

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTTATGCAT--
-ATTGTGCAATA

MA0043.1_HLF/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTTATGCAT--
GGTTACGCAATA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTTATGCAT--
--TTATGCAAAT

MA0033.1_FOXL1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGTTATGCAT-
---TATGTNTA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTTATGCAT-
--TTATGCAAT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTTATGCAT--
GGGATTGCATNN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTTATGCAT--
--ATTTGCATAT