Information for motif28


Reverse Opposite:

p-value:1e-33
log p-value:-7.653e+01
Information Content per bp:1.988
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets491.5 +/- 464.1bp
Average Position of motif in Background391.1 +/- 324.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0136.1_ELF5/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTACCTCCTT
-TACTTCCTT

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTACCTCCTT--
NNNNGGTACCCCCCANN

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTACCTCCTT--
--ACTTCCTBGT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTACCTCCTT-
TTCNAAGTACTTNNNNN

MA0156.1_FEV/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTACCTCCTT
--ATTTCCTG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTACCTCCTT--
--ACTTCCTGBT

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTACCTCCTT---
TTACTTCCTNGTN

MA0598.1_EHF/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTACCTCCTT
--CCTTCCTG

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTACCTCCTT------
GCAACCTCATTATNNNN

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTACCTCCTT----
GATAACATCCTAGTAG