Information for motif31


Reverse Opposite:

p-value:1e-32
log p-value:-7.392e+01
Information Content per bp:1.530
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets475.4 +/- 441.9bp
Average Position of motif in Background699.7 +/- 293.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTAAGTCCGAG
-TAACGTCCGC-

MA0598.1_EHF/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAGTCCGAG
CAGGAAGG-----

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGTCCGAG---
TAGTATTTCCGATCTT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGTAAGTCCGAG
--TAATCCCN--

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTAAGTCCGAG
ACVAGGAAGT-----

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTAAGTCCGAG
CAGGTAAGTAT---

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTAAGTCCGAG--
GGCAAAAGTCCAATAA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTAAGTCCGAG
AGAGGAAGTG----

MA0156.1_FEV/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGTCCGAG
CAGGAAAT-----

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGTAAGTCCGAG
GGTAAGTA--------