Information for motif35


Reverse Opposite:

p-value:1e-27
log p-value:-6.378e+01
Information Content per bp:1.530
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets442.7 +/- 380.3bp
Average Position of motif in Background622.4 +/- 449.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTATGTTAGA---
NCNTTTGTTATTTNN

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTATGTTAGA
GTTTGTT---

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTATGTTAGA
-TATGTNTA-

MA0041.1_Foxd3/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTATGTTAGA--
GAATGTTTGTTT

MA0025.1_NFIL3/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTATGTTAGA-
TTATGTAACAT

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GTATGTTAGA
GGTAAGTA-------

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTATGTTAGA-----
---GGTTAGAGACCT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTATGTTAGA
CAGGTAAGTAT--

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTATGTTAGA-----
NNCTTTGTTTTGNTNNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GTATGTTAGA
CCWGGAATGY----