Information for motif42


Reverse Opposite:

p-value:1e-15
log p-value:-3.458e+01
Information Content per bp:1.948
Number of Target Sequences with motif1248.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif145.0
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets579.2 +/- 475.9bp
Average Position of motif in Background623.4 +/- 478.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCCTG----
AAATTCCCCCCGGAAGT

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCCCCCTG----
AAGCCCCCCAAAAAT

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CCCCCCTG--
TATCGACCCCCCACAG

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCTG-----
CCCCCCCGGGGGNN

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCTG--
CCCCCTGCTGTG

MA0155.1_INSM1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCTG---
CGCCCCCTGACA

PB0100.1_Zfp740_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCCTG---
CCCCCCCCCCCACTTG

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCTG
CCTCACCTG

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCTG------
CCCCCCCGGGGGGGT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCTG
TCCCCA---