Information for motif47


Reverse Opposite:

p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.833
Number of Target Sequences with motif4265.0
Percentage of Target Sequences with motif3.56%
Number of Background Sequences with motif563.5
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets521.3 +/- 455.8bp
Average Position of motif in Background594.9 +/- 478.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--RBGTGTGTRT----
NNGCGTGTGTGCNGCN

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:RBGTGTGTRT----
---TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RBGTGTGTRT---
-NNTGTGGATTSS

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RBGTGTGTRT
-TGCGTG---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RBGTGTGTRT
NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RBGTGTGTRT--
-TGGGTGTGGCN

MA0472.1_EGR2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RBGTGTGTRT-----
GTGCGTGGGCGGGNG

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RBGTGTGTRT--
GGATGTTTGTTT

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----RBGTGTGTRT---
GAAAAGGTGTGAAAATT

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RBGTGTGTRT-
-TGGGTGTGGC