Information for motif49


Reverse Opposite:

p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.799
Number of Target Sequences with motif10708.0
Percentage of Target Sequences with motif8.94%
Number of Background Sequences with motif1488.8
Percentage of Background Sequences with motif8.54%
Average Position of motif in Targets545.7 +/- 463.9bp
Average Position of motif in Background581.6 +/- 444.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCCTGCCC---
--CTGCCCGCA

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCCC-
GCGCCTGCGCA

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCCC------
GGGTGTGCCCAAAAGG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCCC--
GCGCATGCGCAG

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGCCC---
NAGCCCCGCCCCCN

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTGCCC------
GCCCCGCCCCCTCCC

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCTGCCC------
ACATGCCCGGGCAT

NRF1/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCCC--
GCGCATGCGCAC

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCTGCCC----
TCGACCCCGCCCCTAT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCCC------
ATCCCCGCCCCTAAAA