Information for motif6


Reverse Opposite:

p-value:1e-57
log p-value:-1.317e+02
Information Content per bp:1.530
Number of Target Sequences with motif165.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets563.5 +/- 501.6bp
Average Position of motif in Background866.8 +/- 573.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CCGAAGCAAGCT-
------CAAGCTT

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGAAGCAAGCT
-NGAAGC-----

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGCAAGCT-
TACCATAGCAACGGT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCGAAGCAAGCT-
--AAGGCAAGTGT

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCGAAGCAAGCT
-CGGAGC-----

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CCGAAGCAAGCT-----
TGTGACCCTTAGCAACCGATTAA

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCGAAGCAAGCT--
CGACCCAATCAACGGTG

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCGAAGCAAGCT
ATAAACCGAAACCAA--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGAAGCAAGCT
MTGATGCAAT--

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCGAAGCAAGCT
ATGATGCAAT--